DNA 
Counting DNA Nucleotides

22985


RNA 
Transcribing DNA into RNA

20519


REVC 
Complementing a Strand of DNA

18655


FIB 
Rabbits and Recurrence Relations

10408


GC 
Computing GC Content

11220


HAMM 
Counting Point Mutations

12699


IPRB 
Mendel's First Law

6909


PROT 
Translating RNA into Protein

9681


SUBS 
Finding a Motif in DNA

10119


CONS 
Consensus and Profile

5760


FIBD 
Mortal Fibonacci Rabbits

4632


GRPH 
Overlap Graphs

4843


IEV 
Calculating Expected Offspring

4224


LCSM 
Finding a Shared Motif

4068


LIA 
Independent Alleles

2256


MPRT 
Finding a Protein Motif

2466


MRNA 
Inferring mRNA from Protein

3888


ORF 
Open Reading Frames

3019


PERM 
Enumerating Gene Orders

5666


PRTM 
Calculating Protein Mass

4824


REVP 
Locating Restriction Sites

3286


SPLC 
RNA Splicing

3561


LEXF 
Enumerating kmers Lexicographically

3213


LGIS 
Longest Increasing Subsequence

1356


LONG 
Genome Assembly as Shortest Superstring

1572


PMCH 
Perfect Matchings and RNA Secondary Structures

1410


PPER 
Partial Permutations

2054


PROB 
Introduction to Random Strings

1971


SIGN 
Enumerating Oriented Gene Orderings

2184


SSEQ 
Finding a Spliced Motif

2224


TRAN 
Transitions and Transversions

2037


TREE 
Completing a Tree

1855


CAT 
Catalan Numbers and RNA Secondary Structures

610


CORR 
Error Correction in Reads

1048


INOD 
Counting Phylogenetic Ancestors

1398


KMER 
kMer Composition

1594


KMP 
Speeding Up Motif Finding

1310


LCSQ 
Finding a Shared Spliced Motif

1077


LEXV 
Ordering Strings of Varying Length Lexicographically

1839


MMCH 
Maximum Matchings and RNA Secondary Structures

754


PDST 
Creating a Distance Matrix

1130


REAR 
Reversal Distance

626


RSTR 
Matching Random Motifs

857


SSET 
Counting Subsets

1361


ASPC 
Introduction to Alternative Splicing

860


EDIT 
Edit Distance

838


EVAL 
Expected Number of Restriction Sites

660


MOTZ 
Motzkin Numbers and RNA Secondary Structures

407


NWCK 
Distances in Trees

558


SCSP 
Interleaving Two Motifs

509


SETO 
Introduction to Set Operations

1101


SORT 
Sorting by Reversals

496


SPEC 
Inferring Protein from Spectrum

880


TRIE 
Introduction to Pattern Matching

647


CONV 
Comparing Spectra with the Spectral Convolution

584


CTBL 
Creating a Character Table

327


DBRU 
Constructing a De Bruijn Graph

591


EDTA 
Edit Distance Alignment

556


FULL 
Inferring Peptide from Full Spectrum

402


INDC 
Independent Segregation of Chromosomes

444


ITWV 
Finding Disjoint Motifs in a Gene

199


LREP 
Finding the Longest Multiple Repeat

316


NKEW 
Newick Format with Edge Weights

339


RNAS 
Wobble Bonding and RNA Secondary Structures

298


AFRQ 
Counting Disease Carriers

367


CSTR 
Creating a Character Table from Genetic Strings

206


CTEA 
Counting Optimal Alignments

208


CUNR 
Counting Unrooted Binary Trees

199


GLOB 
Global Alignment with Scoring Matrix

387


PCOV 
Genome Assembly with Perfect Coverage

410


PRSM 
Matching a Spectrum to a Protein

302


QRT 
Quartets

165


SGRA 
Using the Spectrum Graph to Infer Peptides

264


SUFF 
Encoding Suffix Trees

230


CHBP 
CharacterBased Phylogeny

113


CNTQ 
Counting Quartets

117


EUBT 
Enumerating Unrooted Binary Trees

104


GASM 
Genome Assembly Using Reads

229


GCON 
Global Alignment with Constant Gap Penalty

254


LING 
Linguistic Complexity of a Genome

136


LOCA 
Local Alignment with Scoring Matrix

260


MEND 
Inferring Genotype from a Pedigree

182


MGAP 
Maximizing the Gap Symbols of an Optimal Alignment

145


MREP 
Identifying Maximal Repeats

124


MULT 
Multiple Alignment

145


PDPL 
Creating a Restriction Map

154


ROOT 
Counting Rooted Binary Trees

179


SEXL 
SexLinked Inheritance

283


SPTD 
Phylogeny Comparison with Split Distance

128


WFMD 
The WrightFisher Model of Genetic Drift

216


ALPH 
AlignmentBased Phylogeny

83


ASMQ 
Assessing Assembly Quality with N50 and N75

187


CSET 
Fixing an Inconsistent Character Set

95


EBIN 
WrightFisher's Expected Behavior

183


FOUN 
The Founder Effect and Genetic Drift

177


GAFF 
Global Alignment with Scoring Matrix and Affine Gap Penalty

218


GREP 
Genome Assembly with Perfect Coverage and Repeats

134


OAP 
Overlap Alignment

119


QRTD 
Quartet Distance

62


SIMS 
Finding a Motif with Modifications

146


SMGB 
Semiglobal Alignment

115


KSIM 
Finding All Similar Motifs

54


LAFF 
Local Alignment with Affine Gap Penalty

124


OSYM 
Isolating Symbols in Alignments

86


RSUB 
Identifying Reversing Substitutions

69

