DNA 
Counting DNA Nucleotides

21924


RNA 
Transcribing DNA into RNA

19548


REVC 
Complementing a Strand of DNA

17779


FIB 
Rabbits and Recurrence Relations

9823


GC 
Computing GC Content

10670


HAMM 
Counting Point Mutations

12112


IPRB 
Mendel's First Law

6514


PROT 
Translating RNA into Protein

9195


SUBS 
Finding a Motif in DNA

9618


CONS 
Consensus and Profile

5474


FIBD 
Mortal Fibonacci Rabbits

4357


GRPH 
Overlap Graphs

4622


IEV 
Calculating Expected Offspring

3989


LCSM 
Finding a Shared Motif

3878


LIA 
Independent Alleles

2121


MPRT 
Finding a Protein Motif

2336


MRNA 
Inferring mRNA from Protein

3687


ORF 
Open Reading Frames

2860


PERM 
Enumerating Gene Orders

5435


PRTM 
Calculating Protein Mass

4576


REVP 
Locating Restriction Sites

3138


SPLC 
RNA Splicing

3375


LEXF 
Enumerating kmers Lexicographically

3119


LGIS 
Longest Increasing Subsequence

1293


LONG 
Genome Assembly as Shortest Superstring

1489


PMCH 
Perfect Matchings and RNA Secondary Structures

1321


PPER 
Partial Permutations

1946


PROB 
Introduction to Random Strings

1859


SIGN 
Enumerating Oriented Gene Orderings

2088


SSEQ 
Finding a Spliced Motif

2115


TRAN 
Transitions and Transversions

1922


TREE 
Completing a Tree

1762


CAT 
Catalan Numbers and RNA Secondary Structures

573


CORR 
Error Correction in Reads

1003


INOD 
Counting Phylogenetic Ancestors

1343


KMER 
kMer Composition

1537


KMP 
Speeding Up Motif Finding

1260


LCSQ 
Finding a Shared Spliced Motif

1031


LEXV 
Ordering Strings of Varying Length Lexicographically

1782


MMCH 
Maximum Matchings and RNA Secondary Structures

712


PDST 
Creating a Distance Matrix

1079


REAR 
Reversal Distance

608


RSTR 
Matching Random Motifs

803


SSET 
Counting Subsets

1302


ASPC 
Introduction to Alternative Splicing

827


EDIT 
Edit Distance

810


EVAL 
Expected Number of Restriction Sites

629


MOTZ 
Motzkin Numbers and RNA Secondary Structures

385


NWCK 
Distances in Trees

539


SCSP 
Interleaving Two Motifs

485


SETO 
Introduction to Set Operations

1057


SORT 
Sorting by Reversals

480


SPEC 
Inferring Protein from Spectrum

841


TRIE 
Introduction to Pattern Matching

617


CONV 
Comparing Spectra with the Spectral Convolution

557


CTBL 
Creating a Character Table

318


DBRU 
Constructing a De Bruijn Graph

569


EDTA 
Edit Distance Alignment

535


FULL 
Inferring Peptide from Full Spectrum

382


INDC 
Independent Segregation of Chromosomes

423


ITWV 
Finding Disjoint Motifs in a Gene

188


LREP 
Finding the Longest Multiple Repeat

304


NKEW 
Newick Format with Edge Weights

324


RNAS 
Wobble Bonding and RNA Secondary Structures

282


AFRQ 
Counting Disease Carriers

349


CSTR 
Creating a Character Table from Genetic Strings

198


CTEA 
Counting Optimal Alignments

197


CUNR 
Counting Unrooted Binary Trees

190


GLOB 
Global Alignment with Scoring Matrix

371


PCOV 
Genome Assembly with Perfect Coverage

391


PRSM 
Matching a Spectrum to a Protein

288


QRT 
Quartets

158


SGRA 
Using the Spectrum Graph to Infer Peptides

250


SUFF 
Encoding Suffix Trees

218


CHBP 
CharacterBased Phylogeny

109


CNTQ 
Counting Quartets

111


EUBT 
Enumerating Unrooted Binary Trees

98


GASM 
Genome Assembly Using Reads

218


GCON 
Global Alignment with Constant Gap Penalty

240


LING 
Linguistic Complexity of a Genome

129


LOCA 
Local Alignment with Scoring Matrix

244


MEND 
Inferring Genotype from a Pedigree

172


MGAP 
Maximizing the Gap Symbols of an Optimal Alignment

137


MREP 
Identifying Maximal Repeats

117


MULT 
Multiple Alignment

134


PDPL 
Creating a Restriction Map

145


ROOT 
Counting Rooted Binary Trees

172


SEXL 
SexLinked Inheritance

266


SPTD 
Phylogeny Comparison with Split Distance

123


WFMD 
The WrightFisher Model of Genetic Drift

203


ALPH 
AlignmentBased Phylogeny

79


ASMQ 
Assessing Assembly Quality with N50 and N75

178


CSET 
Fixing an Inconsistent Character Set

91


EBIN 
WrightFisher's Expected Behavior

174


FOUN 
The Founder Effect and Genetic Drift

168


GAFF 
Global Alignment with Scoring Matrix and Affine Gap Penalty

207


GREP 
Genome Assembly with Perfect Coverage and Repeats

129


OAP 
Overlap Alignment

109


QRTD 
Quartet Distance

60


SIMS 
Finding a Motif with Modifications

138


SMGB 
Semiglobal Alignment

108


KSIM 
Finding All Similar Motifs

50


LAFF 
Local Alignment with Affine Gap Penalty

121


OSYM 
Isolating Symbols in Alignments

79


RSUB 
Identifying Reversing Substitutions

66

