DNA 
Counting DNA Nucleotides

22235


RNA 
Transcribing DNA into RNA

19849


REVC 
Complementing a Strand of DNA

18041


FIB 
Rabbits and Recurrence Relations

9994


GC 
Computing GC Content

10832


HAMM 
Counting Point Mutations

12291


IPRB 
Mendel's First Law

6614


PROT 
Translating RNA into Protein

9335


SUBS 
Finding a Motif in DNA

9763


CONS 
Consensus and Profile

5545


FIBD 
Mortal Fibonacci Rabbits

4427


GRPH 
Overlap Graphs

4679


IEV 
Calculating Expected Offspring

4043


LCSM 
Finding a Shared Motif

3934


LIA 
Independent Alleles

2160


MPRT 
Finding a Protein Motif

2376


MRNA 
Inferring mRNA from Protein

3741


ORF 
Open Reading Frames

2907


PERM 
Enumerating Gene Orders

5509


PRTM 
Calculating Protein Mass

4648


REVP 
Locating Restriction Sites

3179


SPLC 
RNA Splicing

3425


LEXF 
Enumerating kmers Lexicographically

3160


LGIS 
Longest Increasing Subsequence

1317


LONG 
Genome Assembly as Shortest Superstring

1518


PMCH 
Perfect Matchings and RNA Secondary Structures

1347


PPER 
Partial Permutations

1980


PROB 
Introduction to Random Strings

1890


SIGN 
Enumerating Oriented Gene Orderings

2114


SSEQ 
Finding a Spliced Motif

2147


TRAN 
Transitions and Transversions

1952


TREE 
Completing a Tree

1789


CAT 
Catalan Numbers and RNA Secondary Structures

582


CORR 
Error Correction in Reads

1015


INOD 
Counting Phylogenetic Ancestors

1358


KMER 
kMer Composition

1560


KMP 
Speeding Up Motif Finding

1267


LCSQ 
Finding a Shared Spliced Motif

1046


LEXV 
Ordering Strings of Varying Length Lexicographically

1810


MMCH 
Maximum Matchings and RNA Secondary Structures

720


PDST 
Creating a Distance Matrix

1093


REAR 
Reversal Distance

613


RSTR 
Matching Random Motifs

815


SSET 
Counting Subsets

1318


ASPC 
Introduction to Alternative Splicing

839


EDIT 
Edit Distance

819


EVAL 
Expected Number of Restriction Sites

637


MOTZ 
Motzkin Numbers and RNA Secondary Structures

394


NWCK 
Distances in Trees

547


SCSP 
Interleaving Two Motifs

492


SETO 
Introduction to Set Operations

1070


SORT 
Sorting by Reversals

489


SPEC 
Inferring Protein from Spectrum

852


TRIE 
Introduction to Pattern Matching

631


CONV 
Comparing Spectra with the Spectral Convolution

567


CTBL 
Creating a Character Table

321


DBRU 
Constructing a De Bruijn Graph

578


EDTA 
Edit Distance Alignment

545


FULL 
Inferring Peptide from Full Spectrum

388


INDC 
Independent Segregation of Chromosomes

431


ITWV 
Finding Disjoint Motifs in a Gene

191


LREP 
Finding the Longest Multiple Repeat

309


NKEW 
Newick Format with Edge Weights

329


RNAS 
Wobble Bonding and RNA Secondary Structures

289


AFRQ 
Counting Disease Carriers

356


CSTR 
Creating a Character Table from Genetic Strings

203


CTEA 
Counting Optimal Alignments

202


CUNR 
Counting Unrooted Binary Trees

194


GLOB 
Global Alignment with Scoring Matrix

378


PCOV 
Genome Assembly with Perfect Coverage

398


PRSM 
Matching a Spectrum to a Protein

293


QRT 
Quartets

162


SGRA 
Using the Spectrum Graph to Infer Peptides

257


SUFF 
Encoding Suffix Trees

224


CHBP 
CharacterBased Phylogeny

111


CNTQ 
Counting Quartets

114


EUBT 
Enumerating Unrooted Binary Trees

100


GASM 
Genome Assembly Using Reads

222


GCON 
Global Alignment with Constant Gap Penalty

244


LING 
Linguistic Complexity of a Genome

131


LOCA 
Local Alignment with Scoring Matrix

248


MEND 
Inferring Genotype from a Pedigree

175


MGAP 
Maximizing the Gap Symbols of an Optimal Alignment

140


MREP 
Identifying Maximal Repeats

118


MULT 
Multiple Alignment

137


PDPL 
Creating a Restriction Map

149


ROOT 
Counting Rooted Binary Trees

174


SEXL 
SexLinked Inheritance

272


SPTD 
Phylogeny Comparison with Split Distance

124


WFMD 
The WrightFisher Model of Genetic Drift

208


ALPH 
AlignmentBased Phylogeny

79


ASMQ 
Assessing Assembly Quality with N50 and N75

181


CSET 
Fixing an Inconsistent Character Set

91


EBIN 
WrightFisher's Expected Behavior

176


FOUN 
The Founder Effect and Genetic Drift

170


GAFF 
Global Alignment with Scoring Matrix and Affine Gap Penalty

211


GREP 
Genome Assembly with Perfect Coverage and Repeats

130


OAP 
Overlap Alignment

114


QRTD 
Quartet Distance

60


SIMS 
Finding a Motif with Modifications

142


SMGB 
Semiglobal Alignment

113


KSIM 
Finding All Similar Motifs

51


LAFF 
Local Alignment with Affine Gap Penalty

122


OSYM 
Isolating Symbols in Alignments

81


RSUB 
Identifying Reversing Substitutions

67

