DNA 
Counting DNA Nucleotides

23363


RNA 
Transcribing DNA into RNA

20859


REVC 
Complementing a Strand of DNA

18963


FIB 
Rabbits and Recurrence Relations

10600


GC 
Computing GC Content

11404


HAMM 
Counting Point Mutations

12901


IPRB 
Mendel's First Law

7043


PROT 
Translating RNA into Protein

9844


SUBS 
Finding a Motif in DNA

10281


CONS 
Consensus and Profile

5849


FIBD 
Mortal Fibonacci Rabbits

4706


GRPH 
Overlap Graphs

4906


IEV 
Calculating Expected Offspring

4287


LCSM 
Finding a Shared Motif

4127


LIA 
Independent Alleles

2290


MPRT 
Finding a Protein Motif

2502


MRNA 
Inferring mRNA from Protein

3946


ORF 
Open Reading Frames

3064


PERM 
Enumerating Gene Orders

5732


PRTM 
Calculating Protein Mass

4913


REVP 
Locating Restriction Sites

3332


SPLC 
RNA Splicing

3619


LEXF 
Enumerating kmers Lexicographically

3244


LGIS 
Longest Increasing Subsequence

1375


LONG 
Genome Assembly as Shortest Superstring

1587


PMCH 
Perfect Matchings and RNA Secondary Structures

1428


PPER 
Partial Permutations

2079


PROB 
Introduction to Random Strings

1996


SIGN 
Enumerating Oriented Gene Orderings

2204


SSEQ 
Finding a Spliced Motif

2249


TRAN 
Transitions and Transversions

2069


TREE 
Completing a Tree

1880


CAT 
Catalan Numbers and RNA Secondary Structures

623


CORR 
Error Correction in Reads

1060


INOD 
Counting Phylogenetic Ancestors

1413


KMER 
kMer Composition

1611


KMP 
Speeding Up Motif Finding

1323


LCSQ 
Finding a Shared Spliced Motif

1091


LEXV 
Ordering Strings of Varying Length Lexicographically

1852


MMCH 
Maximum Matchings and RNA Secondary Structures

766


PDST 
Creating a Distance Matrix

1144


REAR 
Reversal Distance

631


RSTR 
Matching Random Motifs

866


SSET 
Counting Subsets

1378


ASPC 
Introduction to Alternative Splicing

870


EDIT 
Edit Distance

846


EVAL 
Expected Number of Restriction Sites

669


MOTZ 
Motzkin Numbers and RNA Secondary Structures

412


NWCK 
Distances in Trees

567


SCSP 
Interleaving Two Motifs

514


SETO 
Introduction to Set Operations

1110


SORT 
Sorting by Reversals

498


SPEC 
Inferring Protein from Spectrum

887


TRIE 
Introduction to Pattern Matching

652


CONV 
Comparing Spectra with the Spectral Convolution

588


CTBL 
Creating a Character Table

331


DBRU 
Constructing a De Bruijn Graph

593


EDTA 
Edit Distance Alignment

559


FULL 
Inferring Peptide from Full Spectrum

407


INDC 
Independent Segregation of Chromosomes

447


ITWV 
Finding Disjoint Motifs in a Gene

203


LREP 
Finding the Longest Multiple Repeat

320


NKEW 
Newick Format with Edge Weights

343


RNAS 
Wobble Bonding and RNA Secondary Structures

300


AFRQ 
Counting Disease Carriers

369


CSTR 
Creating a Character Table from Genetic Strings

210


CTEA 
Counting Optimal Alignments

210


CUNR 
Counting Unrooted Binary Trees

202


GLOB 
Global Alignment with Scoring Matrix

390


PCOV 
Genome Assembly with Perfect Coverage

412


PRSM 
Matching a Spectrum to a Protein

305


QRT 
Quartets

168


SGRA 
Using the Spectrum Graph to Infer Peptides

269


SUFF 
Encoding Suffix Trees

232


CHBP 
CharacterBased Phylogeny

114


CNTQ 
Counting Quartets

118


EUBT 
Enumerating Unrooted Binary Trees

106


GASM 
Genome Assembly Using Reads

233


GCON 
Global Alignment with Constant Gap Penalty

258


LING 
Linguistic Complexity of a Genome

140


LOCA 
Local Alignment with Scoring Matrix

263


MEND 
Inferring Genotype from a Pedigree

184


MGAP 
Maximizing the Gap Symbols of an Optimal Alignment

146


MREP 
Identifying Maximal Repeats

126


MULT 
Multiple Alignment

145


PDPL 
Creating a Restriction Map

158


ROOT 
Counting Rooted Binary Trees

182


SEXL 
SexLinked Inheritance

286


SPTD 
Phylogeny Comparison with Split Distance

129


WFMD 
The WrightFisher Model of Genetic Drift

220


ALPH 
AlignmentBased Phylogeny

83


ASMQ 
Assessing Assembly Quality with N50 and N75

190


CSET 
Fixing an Inconsistent Character Set

96


EBIN 
WrightFisher's Expected Behavior

186


FOUN 
The Founder Effect and Genetic Drift

180


GAFF 
Global Alignment with Scoring Matrix and Affine Gap Penalty

220


GREP 
Genome Assembly with Perfect Coverage and Repeats

136


OAP 
Overlap Alignment

121


QRTD 
Quartet Distance

63


SIMS 
Finding a Motif with Modifications

150


SMGB 
Semiglobal Alignment

119


KSIM 
Finding All Similar Motifs

54


LAFF 
Local Alignment with Affine Gap Penalty

127


OSYM 
Isolating Symbols in Alignments

87


RSUB 
Identifying Reversing Substitutions

69

