DNA 
Counting DNA Nucleotides

24164


RNA 
Transcribing DNA into RNA

21557


REVC 
Complementing a Strand of DNA

19587


FIB 
Rabbits and Recurrence Relations

10962


GC 
Computing GC Content

11750


HAMM 
Counting Point Mutations

13296


IPRB 
Mendel's First Law

7285


PROT 
Translating RNA into Protein

10181


SUBS 
Finding a Motif in DNA

10598


CONS 
Consensus and Profile

6010


FIBD 
Mortal Fibonacci Rabbits

4856


GRPH 
Overlap Graphs

5046


IEV 
Calculating Expected Offspring

4432


LCSM 
Finding a Shared Motif

4237


LIA 
Independent Alleles

2344


MPRT 
Finding a Protein Motif

2585


MRNA 
Inferring mRNA from Protein

4071


ORF 
Open Reading Frames

3128


PERM 
Enumerating Gene Orders

5854


PRTM 
Calculating Protein Mass

5064


REVP 
Locating Restriction Sites

3405


SPLC 
RNA Splicing

3698


LEXF 
Enumerating kmers Lexicographically

3292


LGIS 
Longest Increasing Subsequence

1403


LONG 
Genome Assembly as Shortest Superstring

1623


PMCH 
Perfect Matchings and RNA Secondary Structures

1478


PPER 
Partial Permutations

2134


PROB 
Introduction to Random Strings

2034


SIGN 
Enumerating Oriented Gene Orderings

2242


SSEQ 
Finding a Spliced Motif

2291


TRAN 
Transitions and Transversions

2121


TREE 
Completing a Tree

1920


CAT 
Catalan Numbers and RNA Secondary Structures

640


CORR 
Error Correction in Reads

1078


INOD 
Counting Phylogenetic Ancestors

1445


KMER 
kMer Composition

1634


KMP 
Speeding Up Motif Finding

1342


LCSQ 
Finding a Shared Spliced Motif

1112


LEXV 
Ordering Strings of Varying Length Lexicographically

1882


MMCH 
Maximum Matchings and RNA Secondary Structures

778


PDST 
Creating a Distance Matrix

1169


REAR 
Reversal Distance

638


RSTR 
Matching Random Motifs

882


SSET 
Counting Subsets

1410


ASPC 
Introduction to Alternative Splicing

881


EDIT 
Edit Distance

859


EVAL 
Expected Number of Restriction Sites

673


MOTZ 
Motzkin Numbers and RNA Secondary Structures

423


NWCK 
Distances in Trees

576


SCSP 
Interleaving Two Motifs

522


SETO 
Introduction to Set Operations

1134


SORT 
Sorting by Reversals

503


SPEC 
Inferring Protein from Spectrum

896


TRIE 
Introduction to Pattern Matching

660


CONV 
Comparing Spectra with the Spectral Convolution

593


CTBL 
Creating a Character Table

333


DBRU 
Constructing a De Bruijn Graph

601


EDTA 
Edit Distance Alignment

568


FULL 
Inferring Peptide from Full Spectrum

411


INDC 
Independent Segregation of Chromosomes

450


ITWV 
Finding Disjoint Motifs in a Gene

205


LREP 
Finding the Longest Multiple Repeat

321


NKEW 
Newick Format with Edge Weights

346


RNAS 
Wobble Bonding and RNA Secondary Structures

307


AFRQ 
Counting Disease Carriers

373


CSTR 
Creating a Character Table from Genetic Strings

211


CTEA 
Counting Optimal Alignments

214


CUNR 
Counting Unrooted Binary Trees

204


GLOB 
Global Alignment with Scoring Matrix

395


PCOV 
Genome Assembly with Perfect Coverage

418


PRSM 
Matching a Spectrum to a Protein

308


QRT 
Quartets

169


SGRA 
Using the Spectrum Graph to Infer Peptides

271


SUFF 
Encoding Suffix Trees

234


CHBP 
CharacterBased Phylogeny

115


CNTQ 
Counting Quartets

119


EUBT 
Enumerating Unrooted Binary Trees

107


GASM 
Genome Assembly Using Reads

234


GCON 
Global Alignment with Constant Gap Penalty

260


LING 
Linguistic Complexity of a Genome

141


LOCA 
Local Alignment with Scoring Matrix

267


MEND 
Inferring Genotype from a Pedigree

186


MGAP 
Maximizing the Gap Symbols of an Optimal Alignment

149


MREP 
Identifying Maximal Repeats

127


MULT 
Multiple Alignment

146


PDPL 
Creating a Restriction Map

159


ROOT 
Counting Rooted Binary Trees

183


SEXL 
SexLinked Inheritance

291


SPTD 
Phylogeny Comparison with Split Distance

130


WFMD 
The WrightFisher Model of Genetic Drift

223


ALPH 
AlignmentBased Phylogeny

84


ASMQ 
Assessing Assembly Quality with N50 and N75

191


CSET 
Fixing an Inconsistent Character Set

97


EBIN 
WrightFisher's Expected Behavior

190


FOUN 
The Founder Effect and Genetic Drift

182


GAFF 
Global Alignment with Scoring Matrix and Affine Gap Penalty

221


GREP 
Genome Assembly with Perfect Coverage and Repeats

137


OAP 
Overlap Alignment

125


QRTD 
Quartet Distance

64


SIMS 
Finding a Motif with Modifications

152


SMGB 
Semiglobal Alignment

122


KSIM 
Finding All Similar Motifs

55


LAFF 
Local Alignment with Affine Gap Penalty

128


OSYM 
Isolating Symbols in Alignments

90


RSUB 
Identifying Reversing Substitutions

71

