DNA 
Counting DNA Nucleotides

22589


RNA 
Transcribing DNA into RNA

20162


REVC 
Complementing a Strand of DNA

18329


FIB 
Rabbits and Recurrence Relations

10181


GC 
Computing GC Content

11010


HAMM 
Counting Point Mutations

12485


IPRB 
Mendel's First Law

6762


PROT 
Translating RNA into Protein

9497


SUBS 
Finding a Motif in DNA

9926


CONS 
Consensus and Profile

5648


FIBD 
Mortal Fibonacci Rabbits

4521


GRPH 
Overlap Graphs

4754


IEV 
Calculating Expected Offspring

4122


LCSM 
Finding a Shared Motif

3989


LIA 
Independent Alleles

2204


MPRT 
Finding a Protein Motif

2414


MRNA 
Inferring mRNA from Protein

3805


ORF 
Open Reading Frames

2953


PERM 
Enumerating Gene Orders

5591


PRTM 
Calculating Protein Mass

4732


REVP 
Locating Restriction Sites

3225


SPLC 
RNA Splicing

3481


LEXF 
Enumerating kmers Lexicographically

3189


LGIS 
Longest Increasing Subsequence

1338


LONG 
Genome Assembly as Shortest Superstring

1541


PMCH 
Perfect Matchings and RNA Secondary Structures

1376


PPER 
Partial Permutations

2017


PROB 
Introduction to Random Strings

1927


SIGN 
Enumerating Oriented Gene Orderings

2148


SSEQ 
Finding a Spliced Motif

2182


TRAN 
Transitions and Transversions

1991


TREE 
Completing a Tree

1824


CAT 
Catalan Numbers and RNA Secondary Structures

595


CORR 
Error Correction in Reads

1029


INOD 
Counting Phylogenetic Ancestors

1378


KMER 
kMer Composition

1575


KMP 
Speeding Up Motif Finding

1287


LCSQ 
Finding a Shared Spliced Motif

1058


LEXV 
Ordering Strings of Varying Length Lexicographically

1826


MMCH 
Maximum Matchings and RNA Secondary Structures

734


PDST 
Creating a Distance Matrix

1109


REAR 
Reversal Distance

618


RSTR 
Matching Random Motifs

833


SSET 
Counting Subsets

1338


ASPC 
Introduction to Alternative Splicing

847


EDIT 
Edit Distance

829


EVAL 
Expected Number of Restriction Sites

644


MOTZ 
Motzkin Numbers and RNA Secondary Structures

402


NWCK 
Distances in Trees

554


SCSP 
Interleaving Two Motifs

501


SETO 
Introduction to Set Operations

1084


SORT 
Sorting by Reversals

493


SPEC 
Inferring Protein from Spectrum

864


TRIE 
Introduction to Pattern Matching

639


CONV 
Comparing Spectra with the Spectral Convolution

574


CTBL 
Creating a Character Table

325


DBRU 
Constructing a De Bruijn Graph

585


EDTA 
Edit Distance Alignment

552


FULL 
Inferring Peptide from Full Spectrum

396


INDC 
Independent Segregation of Chromosomes

437


ITWV 
Finding Disjoint Motifs in a Gene

196


LREP 
Finding the Longest Multiple Repeat

315


NKEW 
Newick Format with Edge Weights

336


RNAS 
Wobble Bonding and RNA Secondary Structures

295


AFRQ 
Counting Disease Carriers

361


CSTR 
Creating a Character Table from Genetic Strings

205


CTEA 
Counting Optimal Alignments

205


CUNR 
Counting Unrooted Binary Trees

197


GLOB 
Global Alignment with Scoring Matrix

384


PCOV 
Genome Assembly with Perfect Coverage

405


PRSM 
Matching a Spectrum to a Protein

296


QRT 
Quartets

162


SGRA 
Using the Spectrum Graph to Infer Peptides

259


SUFF 
Encoding Suffix Trees

227


CHBP 
CharacterBased Phylogeny

112


CNTQ 
Counting Quartets

115


EUBT 
Enumerating Unrooted Binary Trees

101


GASM 
Genome Assembly Using Reads

226


GCON 
Global Alignment with Constant Gap Penalty

251


LING 
Linguistic Complexity of a Genome

134


LOCA 
Local Alignment with Scoring Matrix

256


MEND 
Inferring Genotype from a Pedigree

179


MGAP 
Maximizing the Gap Symbols of an Optimal Alignment

143


MREP 
Identifying Maximal Repeats

120


MULT 
Multiple Alignment

141


PDPL 
Creating a Restriction Map

151


ROOT 
Counting Rooted Binary Trees

178


SEXL 
SexLinked Inheritance

278


SPTD 
Phylogeny Comparison with Split Distance

126


WFMD 
The WrightFisher Model of Genetic Drift

212


ALPH 
AlignmentBased Phylogeny

81


ASMQ 
Assessing Assembly Quality with N50 and N75

184


CSET 
Fixing an Inconsistent Character Set

94


EBIN 
WrightFisher's Expected Behavior

180


FOUN 
The Founder Effect and Genetic Drift

173


GAFF 
Global Alignment with Scoring Matrix and Affine Gap Penalty

216


GREP 
Genome Assembly with Perfect Coverage and Repeats

132


OAP 
Overlap Alignment

118


QRTD 
Quartet Distance

61


SIMS 
Finding a Motif with Modifications

146


SMGB 
Semiglobal Alignment

115


KSIM 
Finding All Similar Motifs

54


LAFF 
Local Alignment with Affine Gap Penalty

124


OSYM 
Isolating Symbols in Alignments

84


RSUB 
Identifying Reversing Substitutions

68

