DNA 
Counting DNA Nucleotides

20612


RNA 
Transcribing DNA into RNA

18367


REVC 
Complementing a Strand of DNA

16708


FIB 
Rabbits and Recurrence Relations

9184


GC 
Computing GC Content

10042


HAMM 
Counting Point Mutations

11420


IPRB 
Mendel's First Law

6071


PROT 
Translating RNA into Protein

8635


SUBS 
Finding a Motif in DNA

8998


CONS 
Consensus and Profile

5156


FIBD 
Mortal Fibonacci Rabbits

4095


GRPH 
Overlap Graphs

4325


IEV 
Calculating Expected Offspring

3748


LCSM 
Finding a Shared Motif

3631


LIA 
Independent Alleles

1948


MPRT 
Finding a Protein Motif

2197


MRNA 
Inferring mRNA from Protein

3472


ORF 
Open Reading Frames

2651


PERM 
Enumerating Gene Orders

5142


PRTM 
Calculating Protein Mass

4326


REVP 
Locating Restriction Sites

2983


SPLC 
RNA Splicing

3125


LEXF 
Enumerating kmers Lexicographically

2910


LGIS 
Longest Increasing Subsequence

1203


LONG 
Genome Assembly as Shortest Superstring

1374


PMCH 
Perfect Matchings and RNA Secondary Structures

1231


PPER 
Partial Permutations

1824


PROB 
Introduction to Random Strings

1750


SIGN 
Enumerating Oriented Gene Orderings

1969


SSEQ 
Finding a Spliced Motif

1946


TRAN 
Transitions and Transversions

1791


TREE 
Completing a Tree

1680


CAT 
Catalan Numbers and RNA Secondary Structures

542


CORR 
Error Correction in Reads

915


INOD 
Counting Phylogenetic Ancestors

1275


KMER 
kMer Composition

1412


KMP 
Speeding Up Motif Finding

1203


LCSQ 
Finding a Shared Spliced Motif

977


LEXV 
Ordering Strings of Varying Length Lexicographically

1680


MMCH 
Maximum Matchings and RNA Secondary Structures

666


PDST 
Creating a Distance Matrix

1019


REAR 
Reversal Distance

583


RSTR 
Matching Random Motifs

752


SSET 
Counting Subsets

1240


ASPC 
Introduction to Alternative Splicing

779


EDIT 
Edit Distance

777


EVAL 
Expected Number of Restriction Sites

597


MOTZ 
Motzkin Numbers and RNA Secondary Structures

369


NWCK 
Distances in Trees

528


SCSP 
Interleaving Two Motifs

463


SETO 
Introduction to Set Operations

1010


SORT 
Sorting by Reversals

464


SPEC 
Inferring Protein from Spectrum

808


TRIE 
Introduction to Pattern Matching

591


CONV 
Comparing Spectra with the Spectral Convolution

540


CTBL 
Creating a Character Table

312


DBRU 
Constructing a De Bruijn Graph

548


EDTA 
Edit Distance Alignment

515


FULL 
Inferring Peptide from Full Spectrum

365


INDC 
Independent Segregation of Chromosomes

398


ITWV 
Finding Disjoint Motifs in a Gene

181


LREP 
Finding the Longest Multiple Repeat

300


NKEW 
Newick Format with Edge Weights

314


RNAS 
Wobble Bonding and RNA Secondary Structures

272


AFRQ 
Counting Disease Carriers

329


CSTR 
Creating a Character Table from Genetic Strings

191


CTEA 
Counting Optimal Alignments

184


CUNR 
Counting Unrooted Binary Trees

187


GLOB 
Global Alignment with Scoring Matrix

355


PCOV 
Genome Assembly with Perfect Coverage

375


PRSM 
Matching a Spectrum to a Protein

278


QRT 
Quartets

154


SGRA 
Using the Spectrum Graph to Infer Peptides

240


SUFF 
Encoding Suffix Trees

212


CHBP 
CharacterBased Phylogeny

106


CNTQ 
Counting Quartets

107


EUBT 
Enumerating Unrooted Binary Trees

95


GASM 
Genome Assembly Using Reads

212


GCON 
Global Alignment with Constant Gap Penalty

229


LING 
Linguistic Complexity of a Genome

126


LOCA 
Local Alignment with Scoring Matrix

231


MEND 
Inferring Genotype from a Pedigree

166


MGAP 
Maximizing the Gap Symbols of an Optimal Alignment

130


MREP 
Identifying Maximal Repeats

111


MULT 
Multiple Alignment

127


PDPL 
Creating a Restriction Map

138


ROOT 
Counting Rooted Binary Trees

167


SEXL 
SexLinked Inheritance

248


SPTD 
Phylogeny Comparison with Split Distance

120


WFMD 
The WrightFisher Model of Genetic Drift

192


ALPH 
AlignmentBased Phylogeny

74


ASMQ 
Assessing Assembly Quality with N50 and N75

171


CSET 
Fixing an Inconsistent Character Set

88


EBIN 
WrightFisher's Expected Behavior

163


FOUN 
The Founder Effect and Genetic Drift

157


GAFF 
Global Alignment with Scoring Matrix and Affine Gap Penalty

196


GREP 
Genome Assembly with Perfect Coverage and Repeats

125


OAP 
Overlap Alignment

105


QRTD 
Quartet Distance

59


SIMS 
Finding a Motif with Modifications

130


SMGB 
Semiglobal Alignment

104


KSIM 
Finding All Similar Motifs

48


LAFF 
Local Alignment with Affine Gap Penalty

115


OSYM 
Isolating Symbols in Alignments

76


RSUB 
Identifying Reversing Substitutions

62

