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  1. Problem: Working with Files (INI5)
  2. Term: FASTX
  3. Term: FASTA format
  4. Problem: Solve the Turnpike Problem (BA4M)
  5. Problem: FASTQ format introduction (TFSQ)
  6. Term: European Molecular Biology Laboratory
  7. Problem: Installing Python (INI1)
  8. Term: PIR
  9. Problem: Base Quality Distribution (BPHR)
  10. Problem: Read Filtration by Quality (FILT)
  11. Term: Clustal
  12. Term: Bowtie
  13. Problem: Implement 2-BreakOnGenome (BA6K)
  14. Term: Algo: Edge List Format
  15. Problem: Enumerating Unrooted Binary Trees (EUBT)
  16. Problem: Implement GraphToGenome (BA6I)
  17. Problem: Implement CycleToChromosome (BA6G)
  18. Term: GCG
  19. Problem: Implement ColoredEdges (BA6H)
  20. Term: Difference multiset
  21. Problem: Base Filtration by Quality (BFIL)
  22. Problem: Implement 2-BreakOnGenomeGraph (BA6J)
  23. Problem: Implement ChromosomeToCycle (BA6F)
  24. Problem: Implement DecodingIdealSpectrum (BA11B)
  25. Problem: Implement TrieMatching (BA9B)
  26. Problem: Data Formats (FRMT)
  27. Problem: Computing GC Content (GC)
  28. Term: Trimmomatic
  29. Problem: Construct the De Bruijn Graph of a Collection of k-mers (BA3E)
  30. Problem: Pairwise Global Alignment (NEED)
  31. Problem: Implement BetterBWMatching (BA9M)
  32. Problem: Find an Eulerian Cycle in a Graph (BA3F)
  33. Problem: 2-Satisfiability (2SAT)
  34. Problem: Implement PSMSearch (BA11G)
  35. Problem: Implement MotifEnumeration (BA2A)
  36. Problem: Overlap Graphs (GRPH)
  37. Problem: Global Multiple Alignment (CLUS)
  38. Problem: Suboptimal Local Alignment (SUBO)
  39. Problem: Find a Cyclic Peptide with Theoretical Spectrum Matching an Ideal Spectrum (BA4E)
  40. Problem: Implement RandomizedMotifSearch (BA2F)
  41. Problem: Implement GreedyMotifSearch (BA2D)
  42. Problem: Construct a Trie from a Collection of Patterns (BA9A)
  43. Problem: Implement GibbsSampler (BA2G)
  44. Problem: Implement TreeColoring (BA9P)
  45. Problem: Implement BWMatching (BA9L)
  46. Problem: Implement FarthestFirstTraversal (BA8A)
  47. Problem: Implement Hierarchical Clustering (BA8E)
  48. Problem: Implement LeaderboardCyclopeptideSequencing (BA4G)
  49. Term: Algo: Dijkstra's algorithm