July 29, 2015, 12:29 a.m. by Rosalind Team
In this problem, we ask a simple question: how many times can one string occur as a substring of another? Recall from “Find the Most Frequent Words in a String” that different occurrences of a substring can overlap with each other. For example,
Find all occurrences of a pattern in a string.
Given: Strings Pattern and Genome.
Return: All starting positions in Genome where Pattern appears as a substring. Use 0-based indexing.
ATAT GATATATGCATATACTT
1 3 9